AT4G29810.2
0.60052799999999995073
<html><body><title>AT4G29810.2</title>(↑ Click "Links", if this line appears at the beginning.)<br><H1>Other supporting information</H1><table><tr><td colspan="2" align="left"><b>Gene Model</b><br></td></tr><tr><td NOWRAP width="75"></td><td NOWRAP><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u422981002000i/AT4G29810.2.gene_models.png" width="717"><br></td></tr><tr><td colspan=2 align="left"><b>Correlation Plot</b><br></td></tr><tr><td NOWRAP colspan="2" align="left"><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u422981002000i/AT4G29810.2.CorrPlot.jpg" width="800"><br><br></td></tr></table><hr><b>Expression profile (Values are plotted in Log(2) values.)</b><br><img src="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u422981002000i/AT4G29810.2.F0.Expression.png"><br><hr><b>Genes with related expresssion profiles.</b><br><table border=1><tr><th colspan=7 align="left">Positively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u124824001000i">AT1G48240.1</a></td><td>0.877361</td><td>ATNPSN12</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u127668002000i">AT1G76680.2</a></td><td>0.828256</td><td>OPR1</td><td>OMAT1P022570</td><td>-</td><td>OMAT1P119960</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u524208001000i">AT5G42080.1</a></td><td>0.828243</td><td>ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN)</td><td>OMAT5P109970</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u525330001000i">AT5G53300.1</a></td><td>0.822542</td><td>UBC10 (ubiquitin-conjugating enzyme 10)</td><td>OMAT5P113780</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u520455001000i">AT5G04550.1</a></td><td>0.818908</td><td>unknown protein</td><td>OMAT5P101130</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u525890001000i">AT5G58900.1</a></td><td>0.816879</td><td>myb family transcription factor</td><td>OMAT5P115635,OMAT5P115630,OMAT5P115640</td><td>[OMAT5P115635]-, [OMAT5P115630]-, [OMAT5P115640]-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u120714001000i">AT1G07140.1</a></td><td>0.816495</td><td>SIRANBP</td><td>OMAT1P102080</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u322940001000i">AT3G29400.1</a></td><td>0.808874</td><td>ATEXO70E1 (exocyst subunit EXO70 family protein E1)</td><td>OMAT3P109570</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420308001000i">AT4G03080.1</a></td><td>0.782916</td><td>kelch repeat-containing serine/threonine phosphoesterase family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420121001000i">AT4G01210.1</a></td><td>0.780159</td><td>transferase, transferring glycosyl groups</td><td>OMAT4P100510</td><td>-</td><td>-</td><td>-</td></tr><tr><th colspan=7 align="left">Negatively Correlated Genes</th></tr><tr><th>Gens</th><th>PCC</th><th>Definition</th><th>Overlap gene</th><th>Definition</th><th>Overlap gene(antisense)</th><th>Definition</th></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u422120001000i">AT4G21200.1</a></td><td>-0.822135</td><td>GA2OX8 (GIBBERELLIN 2-OXIDASE 8)</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u324348501000i">AT3G43485.1</a></td><td>-0.802857</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u221115001000i">AT2G11150.1</a></td><td>-0.79559</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420661101000i">AT4G06611.1</a></td><td>-0.78903</td><td>pseudogene, hypothetical protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u123836001000i">AT1G38360.1</a></td><td>-0.78863</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u521773001000i">AT5G17730.1</a></td><td>-0.785809</td><td>AAA-type ATPase family protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u420011401000i">AT4G00114.1</a></td><td>-0.781502</td><td>pseudogene of transketolase</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u525109001000i">AT5G51090.1</a></td><td>-0.779999</td><td>unknown protein</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u323041301000i">AT3G30413.1</a></td><td>-0.779357</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr><tr><td><a href="/db/SciNetS_ria227i/cria227s2ria00227u220623001000i">AT2G06230.1</a></td><td>-0.774081</td><td>transposable element gene</td><td>-</td><td>-</td><td>-</td><td>-</td></tr></table><br><a href="/dbfiles/SciNetS_ria227i/cria227s2i/cria227s2ria227u422981002000i/AT4G29810.2-correlation.txt">Get whole results</a><br><br> <HR><b>Over-Representation Analysis Result</b><br><br><table border="1"><tr bgcolor=#FF69B4><td></td><td><i>p</i>-value</td><td> <= 1.56e-20</td><td>:20 terms with high significance</td></a></tr><tr bgcolor=#FFFACD><td>1.56e-20 < </td><td><i>p</i>-value</td><td> <= 8.76e-06</td><td> :With considering multiple testing correction;<br><i>p</i> <= 1.00e-02 / 1142</td></tr><tr bgcolor=#FFFFFF><td>8.76e-06 < </td><td><i>p</i>-value</td><td> <= 1.00e-02</td><td></td></tr></table><br><table border="1"><tr><th>Type of term (*1)</th><th>Depth of the term in ontology tree</th><th>ID/Term</th><th>Description</th><th>Number of genes</th><th>Over-Representative rate (*2)</th><th><i>p</i>-value (*3)</th><th>PosMed <i>p</i>-value (*4)<br> (Link to PosMed)</th><th>Found on gene annotation</th></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0006810</td><td>transport</td><td>27/200</td><td>2.63</td><td>1.40e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=transport">8.46E-16</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0051234</td><td>establishment of localization</td><td>27/200</td><td>2.63</td><td>1.48e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>3</td><td>GO:0051641</td><td>cellular localization</td><td>13/200</td><td>4.42</td><td>1.80e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=cellular%20localization">6.86E-17</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>B</td><td>4</td><td>GO:0070727</td><td>cellular macromolecule localization</td><td>10/200</td><td>5.54</td><td>2.30e-06</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0051649</td><td>establishment of localization in cell</td><td>11/200</td><td>4.08</td><td>1.93e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0046483</td><td>heterocycle metabolic process</td><td>10/200</td><td>3.70</td><td>9.72e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>5</td><td>GO:0006796</td><td>phosphate metabolic process</td><td>17/200</td><td>2.56</td><td>1.33e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006793</td><td>phosphorus metabolic process</td><td>17/200</td><td>2.56</td><td>1.35e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>3</td><td>GO:0033036</td><td>macromolecule localization</td><td>11/200</td><td>3.18</td><td>2.06e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048513</td><td>organ development</td><td>10/200</td><td>2.26</td><td>5.21e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=organ%20development">1.01E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0048731</td><td>system development</td><td>10/200</td><td>2.26</td><td>5.26e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=system%20development">3.35E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>B</td><td>4</td><td>GO:0006952</td><td>defense response</td><td>10/200</td><td>2.20</td><td>6.39e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=defense%20response">5.25E-20</a></td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>C</td><td>3</td><td>GO:0016020</td><td>membrane</td><td>54/200</td><td>1.97</td><td>2.02e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005886</td><td>plasma membrane</td><td>31/200</td><td>2.50</td><td>7.67e-07</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=plasma%20membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>C</td><td>4</td><td>GO:0005737</td><td>cytoplasm</td><td>63/200</td><td>1.68</td><td>4.62e-06</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0044444</td><td>cytoplasmic part</td><td>58/200</td><td>1.67</td><td>1.57e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044424</td><td>intracellular part</td><td>74/200</td><td>1.45</td><td>1.13e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0005622</td><td>intracellular</td><td>76/200</td><td>1.43</td><td>1.54e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=intracellular">8.12E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>4</td><td>GO:0043231</td><td>intracellular membrane-bounded organelle</td><td>65/200</td><td>1.48</td><td>2.04e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043227</td><td>membrane-bounded organelle</td><td>65/200</td><td>1.48</td><td>2.05e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0043229</td><td>intracellular organelle</td><td>65/200</td><td>1.41</td><td>8.62e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>5</td><td>GO:0005829</td><td>cytosol</td><td>10/200</td><td>2.42</td><td>3.16e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=cytosol">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>C</td><td>3</td><td>GO:0044464</td><td>cell part</td><td>110/200</td><td>1.20</td><td>3.47e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=cell%20part">2.86E-16</a></td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0042578</td><td>phosphoric ester hydrolase activity</td><td>10/200</td><td>4.57</td><td>1.43e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0005515</td><td>protein binding</td><td>29/200</td><td>1.85</td><td>4.40e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=protein%20binding">1.31E-27</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0022892</td><td>substrate-specific transporter activity</td><td>13/200</td><td>2.52</td><td>7.51e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0016301</td><td>kinase activity</td><td>17/200</td><td>2.11</td><td>1.27e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=kinase%20activity">1.67E-19</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016772</td><td>transferase activity, transferring phosphorus-containing groups</td><td>18/200</td><td>1.96</td><td>2.24e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0016773</td><td>phosphotransferase activity, alcohol group as acceptor</td><td>13/200</td><td>2.09</td><td>4.05e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>5</td><td>GO:0032555</td><td>purine ribonucleotide binding</td><td>18/200</td><td>1.83</td><td>4.67e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0032553</td><td>ribonucleotide binding</td><td>18/200</td><td>1.83</td><td>4.67e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>3</td><td>GO:0000166</td><td>nucleotide binding</td><td>22/200</td><td>1.67</td><td>6.83e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0016788</td><td>hydrolase activity, acting on ester bonds</td><td>12/200</td><td>2.02</td><td>7.08e-03</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>M</td><td>4</td><td>GO:0017076</td><td>purine nucleotide binding</td><td>18/200</td><td>1.73</td><td>8.32e-03</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009013</td><td>meristem</td><td>159/200</td><td>1.98</td><td>8.42e-31</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=meristem">5.93E-18</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0020030</td><td>cotyledon</td><td>152/200</td><td>2.07</td><td>1.45e-30</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000230</td><td>inflorescence meristem</td><td>155/200</td><td>2.00</td><td>1.13e-29</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=inflorescence%20meristem">7.38E-19</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020038</td><td>petiole</td><td>152/200</td><td>2.00</td><td>1.39e-28</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=petiole">1.02E-19</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0020039</td><td>leaf lamina</td><td>158/200</td><td>1.92</td><td>1.46e-28</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0000013</td><td>cauline leaf</td><td>151/200</td><td>1.95</td><td>4.47e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0009028</td><td>microsporophyll</td><td>155/200</td><td>1.85</td><td>1.93e-25</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009047</td><td>stem</td><td>155/200</td><td>1.84</td><td>4.09e-25</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=stem">4.71E-16</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009025</td><td>leaf</td><td>161/200</td><td>1.75</td><td>1.69e-24</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=leaf">1.24E-18</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>5</td><td>PO:0008037</td><td>seedling</td><td>156/200</td><td>1.77</td><td>2.44e-23</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=seedling">1.16E-17</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0009026</td><td>sporophyll</td><td>156/200</td><td>1.73</td><td>2.72e-22</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>3</td><td>PO:0009031</td><td>sepal</td><td>156/200</td><td>1.69</td><td>6.46e-21</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=sepal">2.76E-19</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PS</td><td>4</td><td>PO:0000037</td><td>shoot apex</td><td>150/200</td><td>1.74</td><td>8.03e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009005</td><td>root</td><td>153/200</td><td>1.70</td><td>2.12e-20</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=root">1.43E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009027</td><td>megasporophyll</td><td>147/200</td><td>1.75</td><td>3.28e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009052</td><td>pedicel</td><td>144/200</td><td>1.77</td><td>5.81e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009032</td><td>petal</td><td>150/200</td><td>1.71</td><td>6.64e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009009</td><td>embryo</td><td>158/200</td><td>1.64</td><td>8.62e-20</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=embryo">2.90E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0008034</td><td>leaf whorl</td><td>155/200</td><td>1.64</td><td>3.19e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0008033</td><td>phyllome whorl</td><td>155/200</td><td>1.64</td><td>3.19e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009010</td><td>seed</td><td>158/200</td><td>1.61</td><td>3.90e-19</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=seed">3.72E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009001</td><td>fruit</td><td>158/200</td><td>1.61</td><td>7.33e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006342</td><td>infructescence</td><td>158/200</td><td>1.61</td><td>7.33e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0006001</td><td>phyllome</td><td>161/200</td><td>1.57</td><td>1.82e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>4</td><td>PO:0009049</td><td>inflorescence</td><td>161/200</td><td>1.54</td><td>2.21e-17</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=inflorescence">2.20E-18</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0009006</td><td>shoot</td><td>163/200</td><td>1.50</td><td>1.29e-16</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=shoot">1.15E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>5</td><td>PO:0009046</td><td>flower</td><td>159/200</td><td>1.53</td><td>1.57e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PS</td><td>3</td><td>PO:0020091</td><td>male gametophyte</td><td>139/200</td><td>1.68</td><td>2.73e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000293</td><td>guard cell</td><td>24/200</td><td>2.23</td><td>7.93e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=guard%20cell">2.21E-18</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0000351</td><td>guard mother cell</td><td>24/200</td><td>2.22</td><td>8.51e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0000070</td><td>meristemoid</td><td>24/200</td><td>2.22</td><td>8.73e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=meristemoid">2.49E-10</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006016</td><td>leaf epidermis</td><td>24/200</td><td>2.16</td><td>1.33e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0006345</td><td>pollen tube</td><td>48/200</td><td>1.65</td><td>1.38e-04</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0006035</td><td>shoot epidermis</td><td>24/200</td><td>2.14</td><td>1.48e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>5</td><td>PO:0000349</td><td>epidermal initial</td><td>24/200</td><td>2.13</td><td>1.65e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0004011</td><td>initial cell</td><td>24/200</td><td>2.11</td><td>1.82e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=initial%20cell">2.07E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004010</td><td>meristematic cell</td><td>24/200</td><td>2.11</td><td>1.86e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0004013</td><td>epidermal cell</td><td>24/200</td><td>2.01</td><td>3.82e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=epidermal%20cell">1.60E-16</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>4</td><td>PO:0005679</td><td>epidermis</td><td>24/200</td><td>1.94</td><td>6.61e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=epidermis">7.47E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>PS</td><td>3</td><td>PO:0009014</td><td>dermal tissue</td><td>24/200</td><td>1.94</td><td>6.65e-04</td><td>-</td><td>yes</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0001054</td><td>4 leaf senescence stage</td><td>151/200</td><td>1.96</td><td>2.61e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0001050</td><td>leaf development stages</td><td>151/200</td><td>1.96</td><td>2.79e-27</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>3</td><td>PO:0007134</td><td>A vegetative growth</td><td>157/200</td><td>1.85</td><td>2.76e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0007133</td><td>leaf production</td><td>156/200</td><td>1.85</td><td>5.73e-26</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=leaf%20production">4.07E-18</a></td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>4</td><td>PO:0007112</td><td>1 main shoot growth</td><td>156/200</td><td>1.85</td><td>5.89e-26</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0001078</td><td>E expanded cotyledon stage</td><td>147/200</td><td>1.77</td><td>9.09e-21</td><td>-</td><td>yes</td></tr><tr bgcolor=#FF69B4><td>PG</td><td>5</td><td>PO:0004507</td><td>D bilateral stage</td><td>146/200</td><td>1.77</td><td>1.56e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001081</td><td>F mature embryo stage</td><td>143/200</td><td>1.80</td><td>2.11e-20</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0001185</td><td>C globular stage</td><td>143/200</td><td>1.74</td><td>5.91e-19</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007616</td><td>4 anthesis</td><td>156/200</td><td>1.61</td><td>2.17e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0001170</td><td>seed development stages</td><td>149/200</td><td>1.65</td><td>8.66e-18</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007631</td><td>embryo development stages</td><td>148/200</td><td>1.64</td><td>1.96e-17</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=embryo%20development%20stages">1.98E-17</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007604</td><td>corolla developmental stages</td><td>155/200</td><td>1.57</td><td>6.58e-17</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>4</td><td>PO:0007600</td><td>3 floral organ development stages</td><td>157/200</td><td>1.54</td><td>1.85e-16</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>3</td><td>PO:0007615</td><td>flower development stages</td><td>158/200</td><td>1.51</td><td>1.25e-15</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFACD><td>PG</td><td>5</td><td>PO:0007605</td><td>androecium developmental stages</td><td>53/200</td><td>1.81</td><td>3.91e-06</td><td>-</td><td>no</td></tr><tr bgcolor="#555555" height="10"><td colspan="9"></td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>plasma</td><td>-</td><td>29/200</td><td>2.53</td><td>1.36e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=plasma">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>interacting</td><td>-</td><td>10/200</td><td>5.66</td><td>1.89e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=interacting">5.00E-25</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>gtpase</td><td>-</td><td>10/200</td><td>5.58</td><td>2.16e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=gtpase">4.99E-17</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>transport</td><td>-</td><td>25/200</td><td>2.57</td><td>5.16e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=transport">8.46E-16</a></td><td>no</td></tr><tr bgcolor=#FFFACD><td>KW</td><td>0</td><td>cytosol</td><td>-</td><td>11/200</td><td>4.46</td><td>8.01e-06</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=cytosol">3.64E-21</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>threonine</td><td>-</td><td>20/200</td><td>2.67</td><td>2.26e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=threonine">1.00E-33</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>membrane</td><td>-</td><td>47/200</td><td>1.77</td><td>2.90e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=membrane">3.64E-21</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr002290</td><td>-</td><td>11/200</td><td>3.73</td><td>4.61e-05</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>phosphatase</td><td>-</td><td>10/200</td><td>3.91</td><td>5.86e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=phosphatase">3.29E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>transporter</td><td>-</td><td>18/200</td><td>2.59</td><td>7.77e-05</td><td>-</td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>terminal</td><td>-</td><td>36/200</td><td>1.87</td><td>8.37e-05</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=terminal">6.83E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>serine</td><td>-</td><td>20/200</td><td>2.24</td><td>2.54e-04</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=serine">1.00E-33</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr017442</td><td>-</td><td>14/200</td><td>2.66</td><td>2.92e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr011009</td><td>-</td><td>16/200</td><td>2.47</td><td>2.92e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr000719</td><td>-</td><td>15/200</td><td>2.41</td><td>5.69e-04</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>ipr017441</td><td>-</td><td>11/200</td><td>2.56</td><td>1.37e-03</td><td>-</td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>phosphorylation</td><td>-</td><td>14/200</td><td>2.28</td><td>1.40e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=phosphorylation">1.86E-18</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>kinase</td><td>-</td><td>19/200</td><td>1.80</td><td>4.71e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=kinase">0</a></td><td>yes</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>intracellular</td><td>-</td><td>11/200</td><td>2.13</td><td>6.01e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=intracellular">8.12E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>subunit</td><td>-</td><td>14/200</td><td>1.91</td><td>7.15e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=subunit">4.21E-16</a></td><td>no</td></tr><tr bgcolor=#FFFFFF><td>KW</td><td>0</td><td>related</td><td>-</td><td>40/200</td><td>1.42</td><td>7.66e-03</td><td><a href="http://omicspace.riken.jp/PosMed/search?actionType=searchexec&objectSet=gene&species=At&condition=GeneIds&associationDirectMode=2&associationRelationMode=2&geneIds1=AT4G29810&keyword=related">8.00E-37</a></td><td>yes</td></tr></table><table><tr><td valign=top>(*1)</td><td>[B]:Biological process(Gene ontology), [C]:Cellular component(Gene ontology), [M]:Molecular function(Gene ontology), [PS]:Plant Structure(Plant ontology), [PG]:Growth and developmental stages(Plant ontology), [KW]:words found in gene description.</td></tr><tr><td valign=top>(*2)</td><td>([# of genes with the term] / [# of sampling (200)]) / ([# of genes with the term among whole genes] / [# of whole genes]) </td></tr><tr><td valign=top>(*3)</td><td>P-values were calculated on hypergeometric distribution in which we found <i>n</i> genes with a annotation term during 200 highly correlated genes, while we had <i>N</i> genes with the term in the whole genes.</td></tr><tr><td valign=top>(*4)</td><td><a href="http://omicspace.riken.jp/PosMed-plus/">PosMed</a> is a system which serve a p-values showing a relationship between the gene and the annotation term based on literature information and Gene-Gene interaction suchas co-expression or protein-protein interactions.</td></tr></table><hr><a href="/db/SciNetS_ria227i/cria227s904i">Top Page</a></body></html>
without_OMAT_gene